MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Bacteroides acidifaciens
19428wH3_P2318
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
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Genome Info
Taxon Description
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NCBI Genome Annotation:
contigs: 233
bases: 5,137,552 bps
CDS: 4,335
rRNA: 8
tRNA: 72
tmRNA: 1
Total number of protein coding genes annotated/found:
4,123
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Items 21 - 40
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5013|JADGKQ010000013.1
MBF0729368.1
Genome Viewer
NA
AA
2019/673
8414-6396
YWFCY domain-containing protein
SEQF5013|JADGKQ010000013.1
MBF0729369.1
Genome Viewer
NA
AA
1248/416
9692-8445
relaxase/mobilization nuclease domain-containing protein
SEQF5013|JADGKQ010000013.1
MBF0729370.1
Genome Viewer
NA
AA
429/143
10099-9671
MobA protein
SEQF5013|JADGKQ010000013.1
MBF0729371.1
Genome Viewer
NA
AA
1050/350
10521-11570
ParA family protein
SEQF5013|JADGKQ010000013.1
MBF0729372.1
Genome Viewer
NA
AA
441/147
11573-12013
DUF3408 domain-containing protein
SEQF5013|JADGKQ010000013.1
MBF0729373.1
Genome Viewer
NA
AA
354/118
12016-12369
DUF3408 domain-containing protein
SEQF5013|JADGKQ010000013.1
MBF0729374.1
Genome Viewer
NA
AA
729/243
12386-13114
conjugal transfer protein TraD
SEQF5013|JADGKQ010000013.1
MBF0729375.1
Genome Viewer
NA
AA
318/106
13316-13633
DUF4134 domain-containing protein
SEQF5013|JADGKQ010000013.1
MBF0729376.1
Genome Viewer
NA
AA
333/111
13644-13976
DUF4133 domain-containing protein
SEQF5013|JADGKQ010000013.1
MBF0729377.1
Genome Viewer
NA
AA
2505/835
13973-16477
TraG family conjugative transposon ATPase
SEQF5013|JADGKQ010000013.1
MBF0729378.1
Genome Viewer
NA
AA
381/127
16518-16898
DUF3876 domain-containing protein
SEQF5013|JADGKQ010000013.1
MBF0729379.1
Genome Viewer
NA
AA
630/210
16922-17551
DUF4141 domain-containing protein
SEQF5013|JADGKQ010000013.1
MBF0729380.1
Genome Viewer
NA
AA
1005/335
17555-18559
conjugative transposon protein TraJ
SEQF5013|JADGKQ010000013.1
MBF0729381.1
Genome Viewer
NA
AA
624/208
18591-19214
conjugative transposon protein TraK
SEQF5013|JADGKQ010000013.1
MBF0729382.1
Genome Viewer
NA
AA
309/103
19221-19529
DUF3989 domain-containing protein
SEQF5013|JADGKQ010000013.1
MBF0729383.1
Genome Viewer
NA
AA
1353/451
19510-20862
conjugative transposon protein TraM
SEQF5013|JADGKQ010000013.1
MBF0729384.1
Genome Viewer
NA
AA
408/136
20915-21322
DUF4138 domain-containing protein
SEQF5013|JADGKQ010000013.1
MBF0729385.1
Genome Viewer
NA
AA
489/163
21341-21829
hypothetical protein
SEQF5013|JADGKQ010000013.1
MBF0729386.1
Genome Viewer
NA
AA
1812/604
21864-23675
group II intron reverse transcriptase/maturase
SEQF5013|JADGKQ010000013.1
MBF0729387.1
Genome Viewer
NA
AA
714/238
23659-24372
conjugative transposon protein TraN
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Items 21 - 40
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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